PhD Opportunity – Impact of Sewage on Antimicrobial Resistance (AMR) and Pathogens in River Environments

NERC RED-ALERT Centre for Doctoral Training

🔬 Research Focus

  • Explore how untreated wastewater (e.g. from sewer overflows or misconnections) contributes to the spread of AMR organisms and human pathogens in river systems.
  • Use advanced molecular methods, including metagenomic sequencing, to profile resistance genes and pathogens in river water and sediments.
  • Conduct catchment-based field sampling in the Taff and Ely rivers to map sewage inputs and their microbial impacts.
  • Link microbial data to water-quality monitoring and potentially inform risk mitigation strategies for public and environmental health.

🏛️ Partners & Impact

  • Host / Supervisors: Cardiff University in partnership with the UK Centre for Ecology & Hydrology (UKCEH).
  • Policy & Industry Partners:
    • Welsh Government (co-supervision & policy input)
    • Dŵr Cymru Welsh Water (technical support & sampling sites)
    • UK Health Security Agency (UKHSA) (expertise in human-pathogen risk)
  • Relevance: Helps fill a key gap in understanding how sewage-related pollution contributes to AMR reservoirs in freshwater environments — directly relevant to “One Health” and environmental-public health strategies.

🧪 Training & Skills Development

  • Lab training: DNA extraction, PCR, sequencing, metagenomics, bioinformatics.
  • Fieldwork: in-situ microbial sampling in river catchments.
  • Data analytics: statistical analysis, data visualisation, and spatial mapping.
  • Scientist-policy exposure: through placements / collaboration with Dŵr Cymru, Welsh Government, and UKHSA.
  • Broader training via the RED-ALERT CDT programme: interdisciplinary courses, real-world problem-solving, “living lab” catchments.

🎯 Who Should Apply

  • Students with degrees in microbiology, environmental science, molecular biology, bioinformatics, or public health.
  • Those passionate about One Health and understanding how environmental pollution impacts microbial risk and human health.
  • Researchers who want to combine field sampling, lab-based molecular work, and data science.
  • People motivated by policy engagement and translating science into strategies for cleaner, safer water systems.

⭐ Why This PhD Matters

  • It investigates a critical “real-world” AMR source: sewer overflows and untreated wastewater.
  • Uses state-of-the-art molecular tools to reveal hidden microbial threats.
  • Supports evidence-based interventions: findings could guide water companies and governments to mitigate AMR risks.
  • Strong interdisciplinary and policy-relevant training, through the RED-ALERT CDT network.

Formal applications should be submitted via the Red-ALERT CDT online application form 

The deadline for applications is 23:59 on Friday 16 January 2026.

More info available at NERC RED-ALERT CDT: Impact of Sewage on Antimicrobial Resistance (AMR) and Pathogens in River Environments

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